diff options
| author | Gertjan van den Burg <gertjanvandenburg@gmail.com> | 2019-01-15 12:14:22 +0000 |
|---|---|---|
| committer | Gertjan van den Burg <gertjanvandenburg@gmail.com> | 2019-01-15 12:14:22 +0000 |
| commit | 5ba8b8652acd7756216552a38f4a07b049d74d4e (patch) | |
| tree | 78ffa4c43bf7c2689b13e8028075e0f3e1662dc8 /src/wrapper.pxd | |
| parent | Change default coef to 1 so we have inhomogeneous poly kernel (diff) | |
| download | pygensvm-5ba8b8652acd7756216552a38f4a07b049d74d4e.tar.gz pygensvm-5ba8b8652acd7756216552a38f4a07b049d74d4e.zip | |
Move wrapper to better folder structure
Diffstat (limited to 'src/wrapper.pxd')
| -rw-r--r-- | src/wrapper.pxd | 136 |
1 files changed, 0 insertions, 136 deletions
diff --git a/src/wrapper.pxd b/src/wrapper.pxd deleted file mode 100644 index 441c15b..0000000 --- a/src/wrapper.pxd +++ /dev/null @@ -1,136 +0,0 @@ -cimport numpy as np - -# Includes - -cdef extern from "gensvm_globals.h": - # Stuff for kerneltype - ctypedef enum KernelType: - pass - -cdef extern from "gensvm_sparse.h": - # stuff for GenSparse - - cdef struct GenSparse: - long nnz - long n_row - long n_col - double *values - long *ia - long *ja - - GenSparse *gensvm_init_sparse() - void gensvm_free_sparse(GenSparse *) - -cdef extern from "gensvm_base.h": - - cdef struct GenData: - long K - long n - long m - long r - long *y - double *Z - GenSparse *spZ - double *RAW - double *Sigma - KernelType kerneltype - double *kernelparam - - cdef struct GenModel: - int weight_idx - long K - long n - long m - double epsilon - double p - double kappa - double lmd - double *V - double *Vbar - double *U - double *UU - double *Q - double *H - double *rho - double training_error - KernelType kerneltype - double *kernelparam - double kernel_eigen_cutoff - - GenModel *gensvm_init_model() - void gensvm_free_model(GenModel *) - - GenData *gensvm_init_data() - void gensvm_free_data(GenData *) - - -cdef extern from "gensvm_task.h": - - cdef struct GenTask: - long ID - long folds - GenData *train_data - GenData *test_data - - KernelType kerneltype - int weight_idx - double p - double kappa - double lmd - double epsilon - double gamma - double coef - double degree - double max_iter - - double performance - double duration - long *predictions - - GenTask *gensvm_init_task() - gensvm_free_task(GenTask *) - -cdef extern from "gensvm_train.h": - - void gensvm_train(GenModel *, GenData *, GenModel *) nogil - -cdef extern from "gensvm_sv.h": - - long gensvm_num_sv(GenModel *) - -cdef extern from "gensvm_queue.h": - - cdef struct GenQueue: - GenTask **tasks - long N - long i - - GenQueue *gensvm_init_queue() - void gensvm_free_queue(GenQueue *) - -cdef extern from "gensvm_helper.c": - - ctypedef char* char_const_ptr "char const *" - void set_model(GenModel *, double, double, double, double, int, int, - double, double, double, double, long, long) - void set_seed_model(GenModel *, double, double, double, double, int, int, - double, double, double, double, long, long, char *, long, long) - void set_data(GenData *, char *, char *, np.npy_intp *, long) - void set_task(GenTask *, int, GenData *, int, double, double, double, - double, double, int, double, double, double, long) - char_const_ptr check_model(GenModel *) - void copy_V(void *, GenModel *) - long get_iter_count(GenModel *) - double get_training_error(GenModel *) - int get_status(GenModel *) - long get_n(GenModel *) - long get_m(GenModel *) - long get_K(GenModel *) - void free_data(GenData *) - void set_verbosity(int) - void gensvm_predict(char *, char *, long, long, long, char *) nogil - void gensvm_train_q_helper(GenQueue *, char *, int) nogil - void set_queue(GenQueue *, long, GenTask **) - double get_task_duration(GenTask *) - double get_task_performance(GenTask *) - void copy_task_predictions(GenTask *, char *, long) |
