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authorGertjan van den Burg <gertjanvandenburg@gmail.com>2019-05-17 15:17:32 -0400
committerGertjan van den Burg <gertjanvandenburg@gmail.com>2019-05-17 15:17:32 -0400
commitad5b0a7800518baf4ac450257d045e5fa2e735d0 (patch)
treef16b60a75ffa60026e1b165a7a216db02442c0bb /gensvm
parentupdate version (diff)
downloadpygensvm-ad5b0a7800518baf4ac450257d045e5fa2e735d0.tar.gz
pygensvm-ad5b0a7800518baf4ac450257d045e5fa2e735d0.zip
bugfix for predict with gamma = 'auto'
Diffstat (limited to 'gensvm')
-rw-r--r--gensvm/__init__.py2
-rw-r--r--gensvm/core.py4
2 files changed, 4 insertions, 2 deletions
diff --git a/gensvm/__init__.py b/gensvm/__init__.py
index 62ac067..c8cd0be 100644
--- a/gensvm/__init__.py
+++ b/gensvm/__init__.py
@@ -1,6 +1,6 @@
# -*- coding: utf-8 -*-
-__version__ = "0.2.2"
+__version__ = "0.2.3"
from .core import GenSVM
from .gridsearch import GenSVMGridSearchCV
diff --git a/gensvm/core.py b/gensvm/core.py
index c994995..f0e7820 100644
--- a/gensvm/core.py
+++ b/gensvm/core.py
@@ -408,6 +408,8 @@ class GenSVM(BaseEstimator, ClassifierMixin):
trainX, accept_sparse=False, dtype=np.float64, order="C"
)
+ gamma = 1.0 / X.shape[1] if self.gamma == "auto" else self.gamma
+
V = self.combined_coef_
if self.kernel == "linear":
predictions = wrapper.predict_wrap(X, V)
@@ -420,7 +422,7 @@ class GenSVM(BaseEstimator, ClassifierMixin):
V,
n_class,
kernel_idx,
- self.gamma,
+ gamma,
self.coef,
self.degree,
self.kernel_eigen_cutoff,