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Diffstat (limited to 'src/trainGenSVM.c')
| -rw-r--r-- | src/trainGenSVM.c | 244 |
1 files changed, 244 insertions, 0 deletions
diff --git a/src/trainGenSVM.c b/src/trainGenSVM.c new file mode 100644 index 0000000..eb75f5d --- /dev/null +++ b/src/trainGenSVM.c @@ -0,0 +1,244 @@ +/** + * @file trainGenSVM.c + * @author Gertjan van den Burg + * @date August, 2013 + * @brief Command line interface for training a single model with GenSVM + * + * @details + * This is a command line program for training a single model on a given + * dataset. To run a grid search over a number of parameter configurations, + * see trainGenSVMdataset.c. + * + */ + +#include <time.h> +#include <math.h> + +#include "gensvm_kernel.h" +#include "libGenSVM.h" +#include "gensvm.h" +#include "gensvm_io.h" +#include "gensvm_init.h" +#include "gensvm_train.h" +#include "util.h" + +#define MINARGS 2 + +extern FILE *GENSVM_OUTPUT_FILE; + +// function declarations +void exit_with_help(); +void parse_command_line(int argc, char **argv, struct GenModel *model, + char *input_filename, char *output_filename, char *model_filename); + +/** + * @brief Help function + */ +void exit_with_help() +{ + printf("This is GenSVM, version %1.1f\n\n", VERSION); + printf("Usage: trainGenSVM [options] training_data_file\n"); + printf("Options:\n"); + printf("-c coef : coefficient for the polynomial and sigmoid kernel\n"); + printf("-d degree : degree for the polynomial kernel\n"); + printf("-e epsilon : set the value of the stopping criterion\n"); + printf("-g gamma : parameter for the rbf, polynomial or sigmoid " + "kernel\n"); + printf("-h | -help : print this help.\n"); + printf("-k kappa : set the value of kappa used in the Huber hinge\n"); + printf("-l lambda : set the value of lambda (lambda > 0)\n"); + printf("-m model_file : use previous model as seed for W and t\n"); + printf("-o output_file : write output to file\n"); + printf("-p p-value : set the value of p in the lp norm " + "(1.0 <= p <= 2.0)\n"); + printf("-q : quiet mode (no output)\n"); + printf("-r rho : choose the weigth specification (1 = unit, 2 = " + "group)\n"); + printf("-t type: kerneltype (LINEAR=0, POLY=1, RBF=2, SIGMOID=3)\n"); + + exit(0); +} + +/** + * @brief Main interface function for trainGenSVM + * + * @details + * Main interface for the command line program. A given dataset file is read + * and a GenSVM model is trained on this data. By default the progress of the + * computations are written to stdout. See for full options of the program the + * help function. + * + * @param[in] argc number of command line arguments + * @param[in] argv array of command line arguments + * + */ +int main(int argc, char **argv) +{ + char input_filename[MAX_LINE_LENGTH]; + char model_filename[MAX_LINE_LENGTH]; + char output_filename[MAX_LINE_LENGTH]; + + struct GenModel *model = gensvm_init_model(); + struct GenData *data = gensvm_init_data(); + + if (argc < MINARGS || gensvm_check_argv(argc, argv, "-help") + || gensvm_check_argv_eq(argc, argv, "-h") ) + exit_with_help(); + parse_command_line(argc, argv, model, input_filename, + output_filename, model_filename); + + // read data file + gensvm_read_data(data, input_filename); + + // copy dataset parameters to model + model->n = data->n; + model->m = data->m; + model->K = data->K; + model->data_file = input_filename; + + // allocate model + gensvm_allocate_model(model); + + // initialize kernel (if necessary) + gensvm_make_kernel(model, data); + + // reallocate model and initialize weights + gensvm_reallocate_model(model, data->n, data->m); + gensvm_initialize_weights(data, model); + + // seed the random number generator (only place in programs is in + // command line interfaces) + srand(time(NULL)); + + if (gensvm_check_argv_eq(argc, argv, "-m")) { + struct GenModel *seed_model = gensvm_init_model(); + gensvm_read_model(seed_model, model_filename); + gensvm_seed_model_V(seed_model, model, data); + gensvm_free_model(seed_model); + } else { + gensvm_seed_model_V(NULL, model, data); + } + + // start training + gensvm_optimize(model, data); + + // write_model to file + if (gensvm_check_argv_eq(argc, argv, "-o")) { + gensvm_write_model(model, output_filename); + note("Output written to %s\n", output_filename); + } + + // free model and data + gensvm_free_model(model); + gensvm_free_data(data); + + return 0; +} + +/** + * @brief Parse command line arguments + * + * @details + * Process the command line arguments for the model parameters, and record + * them in the specified GenModel. An input filename for the dataset is read + * and if specified an output filename and a model filename for the seed + * model. + * + * @param[in] argc number of command line arguments + * @param[in] argv array of command line arguments + * @param[in] model initialized model + * @param[in] input_filename pre-allocated buffer for the input + * filename + * @param[in] output_filename pre-allocated buffer for the output + * filename + * @param[in] model_filename pre-allocated buffer for the model + * filename + * + */ +void parse_command_line(int argc, char **argv, struct GenModel *model, + char *input_filename, char *output_filename, char *model_filename) +{ + int i; + double gamma = 1.0, + degree = 2.0, + coef = 0.0; + + GENSVM_OUTPUT_FILE = stdout; + + // parse options + for (i=1; i<argc; i++) { + if (argv[i][0] != '-') break; + if (++i>=argc) { + exit_with_help(); + } + switch (argv[i-1][1]) { + case 'c': + coef = atof(argv[i]); + break; + case 'd': + degree = atof(argv[i]); + break; + case 'e': + model->epsilon = atof(argv[i]); + break; + case 'g': + gamma = atof(argv[i]); + break; + case 'k': + model->kappa = atof(argv[i]); + break; + case 'l': + model->lambda = atof(argv[i]); + break; + case 'm': + strcpy(model_filename, argv[i]); + break; + case 'o': + strcpy(output_filename, argv[i]); + break; + case 'p': + model->p = atof(argv[i]); + break; + case 'r': + model->weight_idx = atoi(argv[i]); + break; + case 't': + model->kerneltype = atoi(argv[i]); + break; + case 'q': + GENSVM_OUTPUT_FILE = NULL; + i--; + break; + default: + fprintf(stderr, "Unknown option: -%c\n", + argv[i-1][1]); + exit_with_help(); + } + } + + // read input filename + if (i >= argc) + exit_with_help(); + + strcpy(input_filename, argv[i]); + + // set kernel parameters + switch (model->kerneltype) { + case K_LINEAR: + break; + case K_POLY: + model->kernelparam = Calloc(double, 3); + model->kernelparam[0] = gamma; + model->kernelparam[1] = coef; + model->kernelparam[2] = degree; + break; + case K_RBF: + model->kernelparam = Calloc(double, 1); + model->kernelparam[0] = gamma; + break; + case K_SIGMOID: + model->kernelparam = Calloc(double, 1); + model->kernelparam[0] = gamma; + model->kernelparam[1] = coef; + } +} |
