/** * @file gensvm_simplex.c * @author G.J.J. van den Burg * @date 2016-05-01 * @brief Function for generating the simplex matrix * * @details * Contains the function for generating the simplex matrix for a given number * of classes. * * @copyright Copyright 2016, G.J.J. van den Burg. This file is part of GenSVM. GenSVM is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. GenSVM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with GenSVM. If not, see . */ #include "gensvm_simplex.h" /** * @brief Generate matrix of simplex vertex coordinates * * @details * Generate the simplex matrix. Each row of the created matrix contains the * coordinate vector of a single vertex of the K-simplex in K-1 dimensions. * The simplex generated is a special simplex with edges of length 1. The * simplex matrix U of the GenModel must already have been allocated. * * @param[in,out] model a GenModel structure */ void gensvm_simplex(struct GenModel *model) { long i, j, K = model->K; for (i=0; iU, K-1, i, j, -1.0/sqrt(2.0*(j+1)*(j+2))); } else if (i == j+1) { matrix_set(model->U, K-1, i, j, sqrt((j+1)/(2.0*(j+2)))); } else { matrix_set(model->U, K-1, i, j, 0.0); } } } } /** * @brief Generate the simplex difference matrix * * @details * The simplex difference matrix is a 2D block matrix which is constructed * as follows. For each class i, we have a block of K rows and K-1 columns. * Each row in the block for class i contains a row vector with the difference * of the simplex matrix, U(i, :) - U(j, :). * * In the paper the notation @f$\boldsymbol{\delta}_{kj}'@f$ is used for the * difference vector of @f$\textbf{u}_k' - \textbf{u}_j'@f$, where * @f$\textbf{u}_k'@f$ corresponds to row k of @f$\textbf{U}@f$. Due to the * indexing in the paper being 1-based and C indexing is 0 based, the vector * @f$\boldsymbol{\delta}_{kj}'@f$ corresponds to the row (k-1)*K+(j-1) in the * UU matrix generated here. * * @param[in,out] model the corresponding GenModel * */ void gensvm_simplex_diff(struct GenModel *model) { long i, j, l, K = model->K; double value; // UU is a 2D block matrix, where block i has the differences: // U(i, :) - U(j, :) for all j for (i=0; iU, K-1, i, l); value -= matrix_get(model->U, K-1, j, l); matrix_set(model->UU, K-1, i*K+j, l, value); } } } }