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2017-02-21Allow overriding of atlas usage from environment variableGertjan van den Burg1-0/+4
Use as: $ NOATLAS=true make
2017-02-17allow max_iter to be set in the modelGertjan van den Burg3-1/+5
2017-02-17Bump versionGertjan van den Burg1-1/+1
2017-02-17Bugfix for testing on non-atlas systemsGertjan van den Burg1-1/+1
2017-02-17Remove kernelparam array in favour of explicit kernel parametersGertjan van den Burg6-616/+578
This simplifies a lot of the code and will make it easier to link to other languages.
2017-01-02fix for string versionGertjan van den Burg1-1/+1
2016-12-07allow datasets to be stored in libsvm/svmlight formatGertjan van den Burg5-0/+345
2016-12-07moved check for class labels to seperate moduleGertjan van den Burg2-3/+149
2016-12-07add ifndef and GENSVM_ before definesGertjan van den Burg5-54/+54
2016-12-06document undocumented elementsGertjan van den Burg2-5/+55
2016-12-06add msvmmaj matlab file to gitGertjan van den Burg1-0/+361
2016-12-06add unit tests for gensvm_trainGertjan van den Burg4-2/+528
2016-12-05fix missing test in gensvm_optimize and expose doublesortGertjan van den Burg3-17/+69
2016-12-05add octave testfiles to gitGertjan van den Burg11-0/+809
2016-12-05further unit tests for kernel moduleGertjan van den Burg1-1/+3752
2016-12-05Tests and documentation kernel moduleGertjan van den Burg2-1/+154
2016-12-05Improvements and tests for tasks and gridsearchGertjan van den Burg3-10/+1360
2016-11-03prepare for gridsearch unit testingGertjan van den Burg3-0/+247
2016-10-24update copyright informationGertjan van den Burg20-48/+411
2016-10-18fix problems with dense ZV computation when data->n < model->nGertjan van den Burg1-4/+140
2016-10-17minor documentation fixesGertjan van den Burg1-2/+2
2016-10-17refactor gensvm_pred to gensvm_predictGertjan van den Burg1-1/+1
2016-10-17Update predictions to work with sparse matricesGertjan van den Burg2-2/+352
This is done by pulling the Z*V routines from the gensvm_optimize file to a seperate file, since they are shared by prediction and get_loss
2016-10-17Add functionality for cv_util for sparse matricesGertjan van den Burg1-3/+168
2016-10-17Create debug function for printing GenSparse structsGertjan van den Burg3-5/+60
2016-10-14documentation fixesGertjan van den Burg1-2/+2
2016-10-14add sparse matrices to GenSVM and reorganize update functionalityGertjan van den Burg6-757/+1141
2016-10-06documentation fixesGertjan van den Burg2-0/+25
2016-10-06change timer functionality to use clock_monotonic_rawGertjan van den Burg1-0/+34
2016-10-06Switch to using dsyrk instead of dsyr for speed.Gertjan van den Burg2-22/+114
Also added a workspace (GenWork) structure for to hold working matrices for the gensvm_get_update() and gensvm_get_loss() functions
2016-09-30rewrite of the update function to use only rank 1 operations where possibleGertjan van den Burg2-27/+13
2016-09-30Rewrite UU matrix to be K*K*(K-1) instead of n*K*(K-1)Gertjan van den Burg2-215/+177
significant memory reduction by turning the 3D UU matrix into a 2D block matrix, with significantly less dimensions
2016-09-30Remove category matrix from implementationGertjan van den Burg1-69/+5
It's a remnant from the Matlab implementation, where it actually makes sense to use. Here it becomes a significant memory burden for large datasets, and doesn't provide any speedup
2016-09-30minor changes and start on test of gensvm_optimizeGertjan van den Burg3-8/+117
2016-09-30Break up update function and add unit tests for partsGertjan van den Burg1-7/+461
2016-09-22More unit tests for optimizeGertjan van den Burg5-6/+876
Also added auxiliary Octave files used to construct the unit tests
2016-09-21remove output file of test from gitGertjan van den Burg1-20/+0
2016-09-20minor improvementsGertjan van den Burg1-2/+2
2016-09-20Unit tests for printing and removal of gensvm_print_stringGertjan van den Burg3-0/+94
Using gensvm_print_string seemed unnecessary, so removed it
2016-09-20Unit tests and corresponding dataGertjan van den Burg13-0/+1705
2016-09-20Minor improvements and fixesGertjan van den Burg2-2/+3
2016-05-22add unit tests for string utilitiesGertjan van den Burg1-0/+268
2016-05-20further work on unit tests for cmdarg, queue, and baseGertjan van den Burg3-4/+89
2016-05-20add generation of coverage reports with lcovGertjan van den Burg1-1/+6
2016-05-18remove superfluous dependencyGertjan van den Burg1-1/+0
2016-05-17start adding unit testsGertjan van den Burg10-0/+645
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